SECM4 Workshop
March 27-29, 2024, Florida State University
Agenda
Day 1
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8:15: Pickup from hotel
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8:30 - 12:00: Session 1
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Introduction​
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Setup
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Cameras and Frames
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12:00 - 1:00: Lunch​
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1:00 - 2:45: Session 2
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CTF​
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Particle Picking
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Stack Making
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2:45 - 3:15:​ Break
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3:15 - 5:30: Session 3
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2D classification​
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3D refinement
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Day 2
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8:45: Pickup from hotel
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9:00 - 12:00: Session 1
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Relion​
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Advanced particle picking
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Advanced 2D classification
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12:00 - 1:00: Lunch​
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1:00 - 2:45: Session 2
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3D classification​
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2:45 - 3:15:​ Break
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3:15 - 5:30: Session 3
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Frame alignment in CryoSparc​
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Work through the rest of the workflow
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Day 3
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8:45: Pickup from hotel
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9:00 - 12:00: Session 1
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ChimeraX​
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Segmentation
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Focused refinement in CryoSparc
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12:00 - 1:00: Lunch​
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1:00 - 2:45: Session 2
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Modeling ​
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ModelAngelo​
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Alpha Fold​
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Validations
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2:45 - 3:15:​ Break
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3:15 - 5:30: Session 3
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Refinement competition
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Wrap up and Q&A
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Venue and Travel information
Venue
BioUnit I
89 Chieftan Way
Tallahassee, FL 32306
Hotel
Accepted workshop applicants will have rooms reserved for them at a nearby hotel. The workshop will cover the cost of the hotel room for accepted applicants.
Travel and Meals
Participants are responsible for covering their own travel. Meals will not be provided but there are many nearby and affordable locations for meals. The Seminole Cafe is a very short walk from the venue and offers breakfast, lunch, and dinner at a reasonable price.